rs231953122 SNP Detail

Summary

• ID
  rs231953122
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32724189 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTCTCTAT TCTTTCTCAC
  TAGTTTTCAT TTGAAGATTC TTTTGTCAGA TGATAGAACA GCAACACACT TGCTTGCTTG
  TGTTCTAGGT CCATTTCCTT GGCATACCCT TAAAAGTCTG TGAACTAACA TTTTATTTAT
  TTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GGGCACACGT GCCTGTCATG
  M
  CATGGGTGTG GAGGCCAGAG GACAGTTTGC AGGAGTCAAT TCTCTCCTTT CATCATGCTG
  GTCAGTTCTA TGGAGCAGAG TGAAGCTGTT AGTCTTGGCT GCAGGTGCAT TCACACTGAG
  CCATCTTCCT GTCCCCTGAG ATAGCTTAGC GTCCTTTCAC CCTGAGCTAG AATCTTATCT
  GCCTCTTGTA GTGAGATATT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325362202	CHEV_17_32642160	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231953122					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32724189 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f17	cytochrome P450, family 4, subfamily f, polypeptide 17	1215 bp upstream
D17Mit63	DNA segment, Chr 17, Massachusetts Institute of Technology 63	within coordinates
Rr392523	regulatory region 392523	367 bp upstream
Rr525769	regulatory region 525769	418 bp proximal
Tssr143717	transcription start site region 143717	1204 bp upstream
Tssr143718	transcription start site region 143718	1231 bp upstream
Tssr143719	transcription start site region 143719	1259 bp upstream