rs231971190 SNP Detail

Summary

• ID
  rs231971190
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:78715102 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACACACAC GCACACACAC
  ACACACCACA GCACATACAC ATAACAATAA GCAAATACAT GTAATTTTTA AAATCTGGAG
  GTTGAGGTAA ACTGAAAAGC ATCAGAATGT CTTGCCTCTT TCTCTACAGA GCAGTTCCAA
  AGCTGCCACT ACACGTCATT ACAGGTCAGG CTTCATGACA CGAGTTCAGA ACATGGCCAT
  K
  TGGTTCTGAG GGGGAGCCGA TAAATTCCCC AGGGAGGAGG GATCTCCTGC ACGGCCAACC
  CTTGAGTGAT AAATTTCTTA AGCAAAAGGT CTTTAAAATT CCACTGACCT GTGCTCGCTT
  CAGCAGCACA TATACTAAGA TTATCACAGC CCCTGTGCAA GGATGACACG CAAATTCGTG
  AAGTGTTCCA TATTTAATAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323757663	CHEV_11_78637778	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs231971190					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:78715102 () rs orientation: forward

Symbol	Name	Function Class
D11Bhm78	DNA segment, Chr 11, Boehm 78	710 bp distal
D11Bhm79	DNA segment, Chr 11, Boehm 79	212 bp proximal
Gm23219	predicted gene, 23219	111 bp upstream
Rr452071	regulatory region 452071	1712 bp distal
Rr452072	regulatory region 452072	805 bp distal
Rr452073	regulatory region 452073	1276 bp distal
Rr452074	regulatory region 452074	874 bp proximal
Rr452075	regulatory region 452075	1843 bp proximal