rs231998757 SNP Detail

Summary

• ID
  rs231998757
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:7281123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCGGGATGGG TCCCTCGATG
  GCGGACGCCG ACGCCAGGCA GCCCCGGGTG GAAGGGAGGA GGAGGAGGAG GAGAGAGAGA
  CTTAGAGTCA GACAGAGGGA CAGAGAGAGA GACTTAGACA CAGAGACAGA GAGACAGAGA
  GAGGCTCTGT CCCTGCACTC CTACAGGTAC AACCTGGAGC AGCGGACGCG GACCTGAACC
  S
  CCGTCTGCCC GGGGACGCCG CCGCCACGGC CACACCGCTC GTCTGGAACC ACGGCTGGCC
  TTCGGGTCCC AGATCCGTCC CCACGAGGCA GAGAACCGGG GGTGCACTTG CGCGTTTTTC
  GCCACCGGGT GGCCCCGGAG ATCGGCGCTG GGCCCTAGAC GCACTACAGC TCCCATGAGC
  GCCTGGGCCC GACTTCCTGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	C57BL/6J	C57BR/cdJ	C57L/J
ss370610660	MGP_WTSI_7_7230835	EVA_MGPV3	EVA_MGPV3	f	SNP	G	C	G	C
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	C57BL/6J	C57BR/cdJ	C57L/J
rs231998757					SNP	G	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss370610660	MGP_WTSI_7_7230835	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:7281123 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18306	CpG island 18306	within coordinates
Gm45844	predicted gene 45844	within coordinates
Tssr64464	transcription start site region 64464	124 bp downstream
Tssr70610	transcription start site region 70610	79 bp upstream
Tssr70611	transcription start site region 70611	38 bp upstream