rs232113793 SNP Detail

Summary

• ID
  rs232113793
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129471538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAG GTGAGAGTGG GTGATCCAGG
  M
  CAAGGAAAAG ATATGGGAAG GGGGA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320505293	CHEV_2_129455354	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232113793					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129471538 () rs orientation: forward

Symbol	Name	Function Class
Sirpa	signal-regulatory protein alpha	within coordinates
Tssr20162	transcription start site region 20162	363 bp upstream
Tssr20163	transcription start site region 20163	383 bp upstream
Tssr20164	transcription start site region 20164	444 bp upstream
Tssr20165	transcription start site region 20165	474 bp upstream
Tssr20166	transcription start site region 20166	493 bp upstream
Tssr20167	transcription start site region 20167	567 bp upstream
Tssr20168	transcription start site region 20168	693 bp upstream
Tssr20169	transcription start site region 20169	789 bp upstream
Tssr20170	transcription start site region 20170	957 bp upstream
Tssr20171	transcription start site region 20171	969 bp upstream
Tssr20172	transcription start site region 20172	1037 bp upstream
Tssr20173	transcription start site region 20173	1069 bp upstream
Tssr20174	transcription start site region 20174	1114 bp upstream
Tssr20175	transcription start site region 20175	1300 bp upstream
Tssr20176	transcription start site region 20176	1318 bp upstream
Tssr20177	transcription start site region 20177	1650 bp upstream
Tssr20178	transcription start site region 20178	1880 bp upstream
Tssr26273	transcription start site region 26273	364 bp downstream
Tssr26274	transcription start site region 26274	424 bp downstream
Tssr26275	transcription start site region 26275	1004 bp downstream