rs232114622 SNP Detail

Summary

• ID
  rs232114622
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:18515749 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atatatata tatatatata tatatatata
  tatCCTCTGT TTTTTCCTTC CATCAAAGCC TAGGTCAGTT TTCTTTGGTG TCATTTTCTG
  AAAAAAAAAA AAAAAACCTT TTAAGTTTTG GATTTTAGGG AGCTATTACA GAAATACAGC
  W
  AATTCTTTTT AGGGCAAAGT ATAGATACTG TATGGATACC TTACATTAGT TAGTAATATC
  AACTTGAAAT AGGGTGGGAT ATAACATAAG TGGTAATTTT TAAAAGCAGG TTATTCACTG
  AGTTATATAG CTTATACATC CCCATAAATT                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320675297	CHEV_3_18361585	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232114622					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:18515749 () rs orientation: forward

Symbol	Name	Function Class
Gm30667	predicted gene, 30667	241 bp upstream
Gm65525	predicted gene, 65525	within coordinates
Rr573905	regulatory region 573905	926 bp distal