rs232140844 SNP Detail

Summary

• ID
  rs232140844
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:9930779 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCACCTCG AGCGCGTGAA
  AAGACCCCGA GATCTGCTTG GTTCTCTGTA GCTTTTCCTG GGTGTGAGAA GGCTCGGGCC
  ATTCCCACTG TCCCGCATCA CACAAGCACA CCACACACGA TCCTGTCCAG AGTTGTCCTG
  TGCCCCCCAC AATACACACC TCATCCAGGA AGCCTAGGGC ATTGCTCGTG AATGCTTCAC
  Y
  ACCTCCCCTT CCTTTTCTCT CTCTACCTTT CTTTCTGTCG CCCTAAACAA ATAATCTCTT
  CAACCCAGCT GCACTGCCAG TGGCATCTCC TCCTCAGTCT CCCCAGGTGC GTACTGGGAA
  GAGCTGTTGC AACGGAGGAA ACCCAAACTG CCAAGAGCAG GAAACCTGTG TGAACGAGGA
  GGCCAGACCA GGAAATGGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320652249	CHEV_3_9865719	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232140844					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9930779 () rs orientation: forward

Symbol	Name	Function Class
Gm56771	predicted gene, 56771	within coordinates
Rr367411	regulatory region 367411	84 bp upstream
Rr573525	regulatory region 573525	within coordinates