rs232150586 SNP Detail

Summary

• ID
  rs232150586
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:24182617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTGAGGAA GATACTTGTT
  ATCAGCATCT GGCTTCTGCA TCACACGCAC ATGCGCGCGT GCACACACGC GCACACACAC
  ACAAGAGCAT GAGCGCATAC ATACCACAGG TAATTGTTCC TTAGTGTCAT CTGTATTTAG
  TGTCATCTGT CTACTGAAAC TGAGCATGTG TGCAGAGCCC ACTGGTATTT AGTCCTGTCT
  Y
  GGTAGCCTTT TCCTATCTTT ATGTTATAGT AAATTTTTGT TTTGTTTTGG TTTTTGAAAC
  AGGACTTCTT CTGTATCCCT GGCTGTCCTA GAACTTGCTC TGTAGACCAG ACTGGCCTCA
  AAATAAGAGA CCTGCCTGCC TCTGCCTTCC AAGTGCTGGG ATTAATGGTG TGCGCCACCA
  CTATCCAGCG GATTATAGTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325557934	CHEV_18_24208061	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232150586					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:24182617 () rs orientation: forward

Symbol	Name	Function Class
Rr393422	regulatory region 393422	1210 bp upstream
Rr405565	regulatory region 405565	579 bp upstream
Rr534881	regulatory region 534881	1730 bp distal
Rr534882	regulatory region 534882	1857 bp distal
Rr534883	regulatory region 534883	407 bp proximal
Rr534884	regulatory region 534884	526 bp proximal