rs232180617 SNP Detail

Summary

• ID
  rs232180617
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37740685 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctgagaaca actagaagAG AGGATGCGAT
  TGTTTATCCC CCTAATATAA AAATGTCTGT AGTGGGGAGG AACAGCCGGA AGTTCAACAG
  TGCGAGAAAG ATCACTGGGA GAAGGAACGT TAGCGGACCC CTTGACTTAC CCGGTGTAAT
  W
  CTGCTGGGTG TTTTGAGCAG TCAATTAGCC AATGTTTGCT CACCCACTCA ATCTCTTTCT
  GATTCTTtcc cttcctccct ccctctctct ccctccctcT TTTCTTTTGA CTTGTATACT
  TAAAAAACAT ACCCATTCAA ACCTCAAAAT                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320711762	CHEV_3_37585458	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232180617					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37740685 () rs orientation: forward

Symbol	Name	Function Class
Gm65174	predicted gene, 65174	496 bp downstream
Rr575540	regulatory region 575540	243 bp proximal
Rr575541	regulatory region 575541	614 bp proximal
Rr575542	regulatory region 575542	716 bp proximal
Rr575543	regulatory region 575543	1196 bp proximal