rs232195471 SNP Detail

Summary

• ID
  rs232195471
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:152625846 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tggtggctc gacaccgttt gtaactccag
  cttcaggagc tcacacatac tcttctagtt tcctcaggta ctgcattcat atataaataa
  gcagggcaaa actctcatat aaaataaaTC TTTTCTTTAA ATGTTACCAA AAatagatag
  R
  tagatagata gatagataga tagatagata gatagataga tagaAGTCCC TTTGTGGACT
  TAGGGTCTGT TGGTCCAAAC TTGCTCTCCT TCATCTCTAG CTGAAGCCAC TTTAGCTCAG
  GGAACAGAAA AGCAGATCTC CCTGGCTACT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320067888	CHEV_1_154597225	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232195471					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:152625846 () rs orientation: forward

Symbol	Name	Function Class
Apobec4	apolipoprotein B mRNA editing enzyme catalytic polypeptide-like 4	456 bp upstream
Gm28792	predicted gene 28792	within coordinates
Rgl1	ral guanine nucleotide dissociation stimulator,-like 1	within coordinates
Rr31152	regulatory region 31152	within coordinates
Tssr9415	transcription start site region 9415	428 bp upstream
Tssr9416	transcription start site region 9416	432 bp upstream
Tssr9417	transcription start site region 9417	459 bp upstream