rs232199325 SNP Detail

Summary

• ID
  rs232199325
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:121068172 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCTCTATG ATAGGCGGGG
  GCGGGGCTAC GCTACAGAGC TGGTTCTCTA TGATAGGCTG GGCGGGGCAA CGCTCCAGAG
  CTGGTTCTCT ATGATAGGCG GGGGCGGGGC GATGCTACAG AGCTGGTTCT CTATGATAGG
  CAGGGGCGGG GCAACGCTCC AGAGCTGGTT CTCTATGATA GGCGGAGGCG GGGCAACGCT
  M
  CAGAGCTGGT TCTCTCGACG TTCATGCGTA CTGGGAATGG AGCCATAGCA CCATGCCTGC
  ACAACACACA CTTTTGCACA CTGGGCTATC TCACTGTCCA CCCCCCCCCC AAGACATCTC
  ATTCCCCCCC ACTAAGCTAT CTCACTGCCC CCCTTACTGA GTTATCTATC TCACTGTTTC
  CCCCACTGAG CTATCTCACT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324851443	CHEV_14_121229982	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232199325					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:121068172 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6879	CpG island 6879	1162 bp proximal
Rr287001	regulatory region 287001	1972 bp distal
Rr287002	regulatory region 287002	1172 bp distal
Rr287003	regulatory region 287003	829 bp proximal
Rr390218	regulatory region 390218	1302 bp upstream
Rr404289	regulatory region 404289	1040 bp upstream