CATCACTGG GAACATGAGG CCATACAGCT GCTAGACTCT AAGGTAACCG ACCTGCCAGG CAGTGGTACT TCCTGCCACG GTCTCTGGTG AAGCAGCCTA CAGACCCTGC CATGGTCTCC CCATCTACTT AGCACCCTGT GTGTGCCCTT S GTTTGTTTCT GTGCAGGGAA AAGTAATCCA TACTGTGAAG TCAGCATGGG CTCCCAAAGC TATACCACCA GGACCCTGCA GGACACACTA AACCCCAAGT GGAACTTCAA CTGCCAGTTC TTCATCAAGG ATCTTTACCA GGACGTTCTG S = C/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss323874783 | CHEV_12_4719256 | CHEVERUD | SCREENING_POP | f | SNP | G | C |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs232210900 | SNP | G | C |
Location: Chr12:4762450 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Fam228a | family with sequence similarity 228, member A | 1220 bp downstream | ||||||
Gm53750 | predicted gene, 53750 | 203 bp upstream | ||||||
Itsn2 | intersectin 2 | within coordinates | ||||||
Rr260649 | regulatory region 260649 | 351 bp proximal | ||||||
Tssr112576 | transcription start site region 112576 | 107 bp downstream | ||||||
Tssr112577 | transcription start site region 112577 | 73 bp downstream | ||||||
Tssr115645 | transcription start site region 115645 | 192 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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