rs232210900 SNP Detail

Summary

• ID
  rs232210900
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4762450 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CATCACTGG GAACATGAGG CCATACAGCT
  GCTAGACTCT AAGGTAACCG ACCTGCCAGG CAGTGGTACT TCCTGCCACG GTCTCTGGTG
  AAGCAGCCTA CAGACCCTGC CATGGTCTCC CCATCTACTT AGCACCCTGT GTGTGCCCTT
  S
  GTTTGTTTCT GTGCAGGGAA AAGTAATCCA TACTGTGAAG TCAGCATGGG CTCCCAAAGC
  TATACCACCA GGACCCTGCA GGACACACTA AACCCCAAGT GGAACTTCAA CTGCCAGTTC
  TTCATCAAGG ATCTTTACCA GGACGTTCTG                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323874783	CHEV_12_4719256	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232210900					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4762450 () rs orientation: forward

Symbol	Name	Function Class
Fam228a	family with sequence similarity 228, member A	1220 bp downstream
Gm53750	predicted gene, 53750	203 bp upstream
Itsn2	intersectin 2	within coordinates
Rr260649	regulatory region 260649	351 bp proximal
Tssr112576	transcription start site region 112576	107 bp downstream
Tssr112577	transcription start site region 112577	73 bp downstream
Tssr115645	transcription start site region 115645	192 bp upstream