rs232213004 SNP Detail

Summary

• ID
  rs232213004
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:97241259 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCACTATC CTCACCAGGA
  CAGACTTCCT GACTCTGCAC TAGAGATAGA GATAGAGATA TATTCAGAGA CCGATGGCGA
  TTGCGTAATC TGAGGTGGAG ACTTTGCCGA CGTGTTCATA ACCTTTAGTC TGTGAATTCA
  AAACAATTTT GTAAAATGCA TTTTTTCTAA ATTTTATTGG TCCCCCCCCC CCCCCCCCCC
  S
  CTCTGTGTGC ACTGAGGTTT TGCCTGCTGA AAGAACAGGG GGTGCTCTGA GCACTCTCTC
  CAGCCCTACC TCTGTGAGTG TGTGAGTGTG TGTGTGTGTG TGTGAGAGAG AGAGAGAGAG
  AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGACATACTG TAGCTCAGAC TGGCTGGCTT
  TGAACTCACA GATTTCTGTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325076718	CHEV_15_97173809	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232213004					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97241259 () rs orientation: forward

Symbol	Name	Function Class
Gm33325	predicted gene, 33325	317 bp upstream
Pced1b	PC-esterase domain containing 1B	Intron
Rr404591	regulatory region 404591	674 bp downstream
Rr508793	regulatory region 508793	328 bp distal
Rr508794	regulatory region 508794	within coordinates
Rr508795	regulatory region 508795	1733 bp proximal