rs232293392 SNP Detail

Summary

• ID
  rs232293392
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:152665578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGTTGTGT GTTGGTTGGT AGCTTGGATG
  TTGGTTGCTT TGTGGTGTTG TTTTAATGGG GGGGAGGGCA GGGAGAGACA GAGACACAGA
  GACAGAGAGA GAAGGGgtct ggaaatcaga ggataaccta gaatgtcgat cctaactttc
  Y
  accttgtttg aggcagagtc tcttgcttgt ggctttgcct gccaggctag ctggcctgca
  aacttccagg gattctcctg ggattacaga caagtcctgc caccacatcc agctgtttac
  atggcttctt tctttctttt ttctttttct                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320068145	CHEV_1_154636957	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232293392					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:152665578 () rs orientation: forward

Symbol	Name	Function Class
Rr420541	regulatory region 420541	406 bp proximal
Rr420542	regulatory region 420542	509 bp proximal
Rr420543	regulatory region 420543	633 bp proximal