rs232302872 SNP Detail

Summary

• ID
  rs232302872
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:164264200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT TTATCTTTTC TGACACTAAG
  R
  CCATTTATTA AATATGGCCA AGAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320086023	CHEV_1_166366762	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232302872					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164264200 () rs orientation: forward

Symbol	Name	Function Class
Atp1b1	ATPase, Na+/K+ transporting, beta 1 polypeptide	478 bp downstream
Nme7	NME/NM23 family member 7	within coordinates
Tssr9784	transcription start site region 9784	1844 bp upstream
Tssr14731	transcription start site region 14731	785 bp downstream
Tssr14732	transcription start site region 14732	1108 bp downstream
Tssr14733	transcription start site region 14733	1217 bp downstream
Tssr14734	transcription start site region 14734	1245 bp downstream
Tssr14735	transcription start site region 14735	1313 bp downstream
Tssr14736	transcription start site region 14736	1346 bp downstream
Tssr14737	transcription start site region 14737	1409 bp downstream
Tssr14738	transcription start site region 14738	1544 bp downstream
Tssr14739	transcription start site region 14739	1710 bp downstream
Tssr14740	transcription start site region 14740	1764 bp downstream
Tssr14741	transcription start site region 14741	1793 bp downstream
Tssr14742	transcription start site region 14742	1900 bp downstream