rs232304447 SNP Detail

Summary

• ID
  rs232304447
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:88948710 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCAG GCGATGCCAT GCCTGCAACT
  R
  CGGCAGTTCA TTTGAATTTT GGCGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323064211	CHEV_9_88961495	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232304447					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:88948710 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22121	CpG island 22121	within coordinates
Gm68594	predicted gene, 68594	within coordinates
Rr684355	regulatory region 684355	within coordinates
Rr684356	regulatory region 684356	59 bp proximal
Rr684357	regulatory region 684357	167 bp proximal
Rr684358	regulatory region 684358	332 bp proximal
Tssr86421	transcription start site region 86421	313 bp upstream
Tssr86422	transcription start site region 86422	390 bp upstream