rs232331601 SNP Detail

Summary

• ID
  rs232331601
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:57240260 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttattatat gtaagtacaa tgtagctgac
  ttcagacaca ccagaagagg gcatcagatc tcattacagg tggttgtgac ctaccatatg
  gttgctggga tttgaactct ggaccttcag aagagcagtc agtgctctta cccattgaac
  Y
  atctcgccag ccatgacaag cccttttaaa caactgtcat gggagtaatc acttgctgct
  ttgttggtag ttccttattg tactgcttgc ccaaaatact tgcatgtaat taaaatggta
  taaaaagtga aggaaaataa aaatttgcct                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322972046	CHEV_9_57180784	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232331601					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:57240260 () rs orientation: forward

Symbol	Name	Function Class
Gm5121	predicted gene 5121	1151 bp upstream
Tssr85298	transcription start site region 85298	1089 bp upstream