rs232378576 SNP Detail

Summary

• ID
  rs232378576
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26319135 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTATTTTAT ATATGTGAGT
  ACACTGTCAC TGTCTTCAGA CACACCATGT GGTTGCTGGG AATTGAACTC AGGACCTCTG
  GAAGAGCAGT CAGTGCTCTT AACCGCTGAG CCACCTCTCC AGCTCCCCTG TACTGATTCT
  TAAGGTTAAC TGGGCTGTTT GAGTTGGTCG ATTAATGCCT TTCTTCAAGT CTGAAAAATA
  W
  AGGTATTTTA ACCAATACTT TTTTCTGTCT CAGTCTCTTT CATACTCTCC GGGAACTCTA
  ATTTCCCTTT AGCCCTCTTT CTGCCCTACT AAAGTTACTA CTGGAAGTAT GTAAAACATG
  CAGGAATGAG GGCTGCTTCT ATGTAGAAGG TCCAGGGTGT CACTCCTGCC TGCCAGGTCG
  GGTTACTTGC TGCCAGGCAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325339835	CHEV_17_26237106	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232378576					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26319135 () rs orientation: forward

Symbol	Name	Function Class
Gm8186	predicted gene 8186	940 bp upstream
Rr523763	regulatory region 523763	706 bp distal
Rr523764	regulatory region 523764	1353 bp proximal
Tssr146918	transcription start site region 146918	902 bp upstream