rs232467434 SNP Detail

Summary

• ID
  rs232467434
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110231660 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCACTTTCT ATACCTTATC
  TCACCAAGTT CTTACAGTAG CTTTCTGAAG GAGGTGTTAT TATCTCTCTT AGTAGATAAG
  GAAGCTGAAC TTCAGAGAGG TGAAGTAACT CAGGCAAGGT CACACAGCGA GTGGTGGAAC
  GTGGCTATGC ACCCAAGTGC TACAGGCTAT TTTGATGCTA TGAAGACATA GGGAGTAAAA
  Y
  GAGATAATTT TAACCTTTAG ATTCTCAGGC CAGATGTCTC CACATGTCTT CTAACTCTGA
  GGATGGCGTC AGTAGGTGAT TTGCGCCCCA CGGTGATTCT GAGAGCTTTC CATGGGAGCT
  AGTAGGATGG GGAAGGGGAA CTGCTCTAGC GCTGAGCTCA ATAAGCACAA AGGAAAGAAA
  CAAAGTGAGT TGTGAATTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322397546	CHEV_7_117775967	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232467434					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110231660 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19578	CpG island 19578	1650 bp distal
Gm28863	predicted gene 28863	1556 bp upstream
Rr400547	regulatory region 400547	1945 bp downstream
Rr653272	regulatory region 653272	1741 bp distal
Rr653274	regulatory region 653274	530 bp distal