rs232467999 SNP Detail

Summary

• ID
  rs232467999
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:105721362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCTTGGTG GCACTAAGCA
  CTCAGCTTGC CCATGGTGCT GACAGTGACA TCTTCGCAGA GGGCAGCATC CATCAGTTGT
  TCCCTCCTGC TGCTAGCTCC CTTTAGAAGC CTTTCATTTG AGTTTCTCAT TTTTAAGATA
  GTGGGAGGGT AATGGTGATT CGTTTTGATT TCCTCTCACT AACCAAAGCT TTTGTATCTG
  R
  ATCCTGCTGC CCCAGCTGTG CCGCCTAAAC AAACACATTC AGAGCACACA GAAGCTGGGC
  CAAGATATGT CCACTTCACC TTAGAAAGTA CCATTCCATT ACAGGCCATT TTAAGAACTA
  CTTTGGGCCC TTCTTTCTTC ACACAATAAA CATACATAAG ACGGCTGGGG ATGTAGGTCA
  GTGGTAGAAC TACATGCCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320863269	CHEV_3_105616964	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232467999					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105721362 () rs orientation: forward

Symbol	Name	Function Class
Gm5547	predicted gene 5547	1521 bp upstream
Rr582787	regulatory region 582787	1029 bp proximal
Rr582788	regulatory region 582788	1544 bp proximal
Tssr31084	transcription start site region 31084	1484 bp upstream