rs232498965 SNP Detail

Summary

• ID
  rs232498965
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117642276 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTGACGAT CCTAGAAGAG
  TGCTTTTGCT TCTTTGTCCT TCACAAGACT GAGTTAGCTG CATAAAAAAG GTTGAATTTC
  AGGTAATATC AGAAAGCTAA ACTCTTGGCT TTTTTGAAAG ATTAAAAAAA AAATTGTGAA
  TGCTGGGATC ACAGGCTTGT GCCACCACGC ACTTAACATG CCCGTTCCCC ACCCCACCCC
  S
  CTCACCCTGG ATGTGTGCAT GTGTGTCTAT ATCTGTATTT ATCTCCAGGC TGGTCTTGAG
  TTTAGGATCC TACCTGAGCC TCTGGAGGCC TGGGACAACA GGCATGATCA CCACCAAACT
  TACTGCTTAC AACTGATGTA TGTTTGTTAT GCATCAGTCG TAAATTGTTC AATTATTCTT
  CCTATTGATA GGCACACAGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499636	CHEV_10_117243427	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232498965					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117642276 () rs orientation: forward

Symbol	Name	Function Class
Gm67590	predicted gene, 67590	within coordinates
Rr218193	regulatory region 218193	876 bp distal
Rr218194	regulatory region 218194	1525 bp proximal
Rr221673	regulatory region 221673	within coordinates
Rr225990	regulatory region 225990	1276 bp distal
Rr385360	regulatory region 385360	within coordinates
Rr402273	regulatory region 402273	1710 bp upstream