rs232518109 SNP Detail

Summary

• ID
  rs232518109
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:24513184 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTACTGTTA ATTAAGTTAA TATAGTTTTT
  AAGAACACAG AATATGCTTA AAAGGAAAAA AAATTAAGCC AGTAGAACAG AAAGGGAGAA
  AATAAACAGT GAAATAAACC TCTATTGTTA ATACTCTAGT TTTACTTCTT AGAGTCAAGC
  W
  ATATAATTTT ACAAATTGTT CCTTGATGAA TTTATAATTG GAACCCTATA TCCTAAAATA
  TATAAACTTT TCTGCGTTTT TAAACATTGA TGCAGCTTTG TGGGTTTTAC TCATTCTGTA
  TTTAACATTT TAAAGTACTA TGTCTACCTC                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321770809	CHEV_6_24463185	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232518109					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:24513184 () rs orientation: forward

Symbol	Name	Function Class
Gm67852	predicted gene, 67852	1370 bp upstream
Iqub	IQ motif and ubiquitin domain containing	within coordinates
Rr627228	regulatory region 627228	1444 bp proximal
Rr627229	regulatory region 627229	1872 bp proximal
Rr627230	regulatory region 627230	1927 bp proximal
Tssr59986	transcription start site region 59986	1851 bp downstream