rs232528082 SNP Detail

Summary

• ID
  rs232528082
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:88278038 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGTTGGCA AGTTAGGACA
  TGGATGTTAG GCAAGACAAG TCCTTTGACA CAGCTGGATA CCCCCAGCCA ATGAGGGCAG
  GATAAATGCA CAGTAAAGAC ACGTTCCTAA GGAAATCCCC CATCCCTAAA GCCTGATTAG
  TGGAATAACT TGACATGGAT GTTTGTGGAT TTTAGGCTTA AAATTTCCAT AGGATTCTAG
  Y
  TAGGAGACAC AGTTCCTGAG TCTGGACTAT GTCCCTGAAT GATCAGTCTT GGGTGTGGCA
  TTTAATAAGC CATCCCTGTT TGACTGAGAT CAGTGTCTGA GTAGTTTGTG TGGTGATCTC
  CAGACCCAAC AATGTGTATA AAATATATAT GGATACACAC AGTATGTGTG TGTGTGGTGT
  GTATCTCTGT GTATGTGTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325500519	CHEV_17_88369950	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232528082					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:88278038 () rs orientation: forward

Symbol	Name	Function Class
Gm50041	predicted gene, 50041	1390 bp upstream
Rr333904	regulatory region 333904	1638 bp distal
Rr343663	regulatory region 343663	1039 bp distal
Rr405523	regulatory region 405523	1434 bp upstream