rs232554526 SNP Detail

Summary

• ID
  rs232554526
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:143283082 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTTGTCAG AAAGATACAA
  AGTCAGGCAG ATAAAAAGGC AGGCAGATTC CTGAGTTCAA GATCAGTCAG AGACACAGCT
  AGGTTAGGAC CAGGTGTGGT AGGAACAGCA ATCTCATTGT CTGTGCTCAC AAAGGTAGGC
  AAATTGCTGA ATTCATTTGC AATGTTAAAA AAAATGTGCT TGCTGTCTCT AAGAATCAAA
  K
  ATCTGGGGAC ATGGAATACT GATTCATGAG ATAATCAGAC AGGAACCTAG GATAATGACT
  GATTTGATAT GTAAATAAAA GACTGGACTT TTGATCTGCA AATGTGAGCT ATCCAGAGAG
  GTTTTTAGAT TTTTTTTTTC AAGAGAGAGC TGTCTCGAGC AGAACACAGG CCATTAGCTT
  TTACCCCATG ATTAGCTTCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322052291	CHEV_6_143285876	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232554526					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:143283082 () rs orientation: forward

Symbol	Name	Function Class
Rr380238	regulatory region 380238	within coordinates