rs232565559 SNP Detail

Summary

• ID
  rs232565559
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135872672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGAAATCA AGCTTGTTCT
  TGGGCCTGGC ACATACATAG GGGTGAGGCA GGGCTTGTCA CAGCCTGGCC ACACACTTTC
  TATGGACCTG GCATCTGAGC CAGTTTTCAC ATCTTTGATG TATAGGGGAA AGAGACAGAT
  GCTCCGTCCA CGTGTCAAAA ACTCTAAGTT TAAGGTGAGC ACCCTGGCCT CTGGCTCCCT
  R
  CTGCACCACA GTCCCAGCTG TGACTGGGCA GACCCTTGAT TTCCCTAGCT CTTCACAACT
  TTACATTTAA AATGAAGGTA GGATACCCCC CTCCTAGGCT CATTAGACGA GTCCAATGAT
  AGCTTCTAGG ATAGCTTCTA GAATCCTCCA TGAAGCGCTG GATGTAGAGT GTTTGCCAAG
  AATCCACCTC TCCACCCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321697857	CHEV_5_136319688	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232565559					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135872672 () rs orientation: forward

Symbol	Name	Function Class
Rr622447	regulatory region 622447	110 bp distal
Srrm3	serine/arginine repetitive matrix 3	within coordinates
Srrm3os	serine/arginine repetitive matrix 3, opposite strand	within coordinates