TGGCAACACA AGATACTCCA GATAGAGGTG TTAAACAGCC AGTCCAGTTT GGAAACTAAG CAAGAAAACA TTCTATCACG ACACAAATGT GTGAAATACT ATCTTTCTGT GCTCACTGAA CTCCACAGAG CCATAGAAGG GCAGTTTTTC CTAGGGCCAA GCCTAGAGGC ACGGCCATCA CCTTTCCATA TTCCCTTCCC R GGAAGCATTC TCTTTAATCA AACAGCACAC TTGTAAGGAA CTTCCCCTAT GCCCACCAAG GTAATTTAAA AACCAACTTA AATACGTCGG GTAACGCTTG TCAAAAACCT GGATAGGACT CAGATTTCTG GTCACGCTTA ATTTCAAAAG TTGGCTTATT TGTATTATAT TTCTCCATTC TCAAATATCA GTTCATTCAT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss323643772 | CHEV_11_36489652 | CHEVERUD | SCREENING_POP | f | SNP | A | G |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs232575288 | SNP | A | G |
Location: Chr11:36566977 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi2736 | CpG island 2736 | 1276 bp proximal | ||||||
Rr233627 | regulatory region 233627 | 977 bp distal | ||||||
Rr246545 | regulatory region 246545 | within coordinates | ||||||
Tenm2 | teneurin transmembrane protein 2 | within coordinates | ||||||
Tssr107449 | transcription start site region 107449 | 1341 bp downstream | ||||||
Tssr107450 | transcription start site region 107450 | 1531 bp downstream | ||||||
Tssr107451 | transcription start site region 107451 | 1581 bp downstream | ||||||
Tssr107452 | transcription start site region 107452 | 1622 bp downstream | ||||||
Tssr107453 | transcription start site region 107453 | 1668 bp downstream | ||||||
Tssr107454 | transcription start site region 107454 | 1717 bp downstream | ||||||
Tssr107455 | transcription start site region 107455 | 1763 bp downstream | ||||||
Tssr107456 | transcription start site region 107456 | 1800 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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