rs232601269 SNP Detail

Summary

• ID
  rs232601269
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:84337326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCAGAGACT GCAGGGAGGG GAGGAGTGGT
  GGAGAACAGA CAGGGTGGCT TCACAAAACA TGGAGTTTTC TCCCACTTGC TGGTTTTGCC
  CTGAGAAGTA CCAAAGGGTG CCAAACTTTC CACAGCCGGT TTGAAGGGAT TCGGTGTAGA
  R
  ATTAACAGAA ATCTTAGTTC CTCATGCAAA CATAGCAACT AGGAACCAGT CACAAGAACA
  GTGAGTCTTC CTGATTAAAG GAAGGAAGCA GAATCGTAAC GTTTTCATCT CTATTTTATT
  ACTGATTGCC TACAACTTTC TACCACGATC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322297944	CHEV_7_91836628	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232601269					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:84337326 () rs orientation: forward

Symbol	Name	Function Class
2610206C17Rik	RIKEN cDNA 2610206C17 gene	1522 bp upstream
Cpgi19383	CpG island 19383	1188 bp proximal
Rr400423	regulatory region 400423	1696 bp upstream
Rr650631	regulatory region 650631	150 bp proximal
Rr650632	regulatory region 650632	1094 bp proximal
Rr650633	regulatory region 650633	1637 bp proximal
Rr650634	regulatory region 650634	1829 bp proximal
Tssr73444	transcription start site region 73444	1676 bp downstream
Tssr73445	transcription start site region 73445	1705 bp downstream
Tssr73446	transcription start site region 73446	1727 bp downstream
Tssr73447	transcription start site region 73447	1786 bp downstream
Tssr73448	transcription start site region 73448	1816 bp downstream
Tssr73449	transcription start site region 73449	1830 bp downstream
Tssr73450	transcription start site region 73450	1862 bp downstream
Zfand6	zinc finger, AN1-type domain 6	Intron