rs232616918 SNP Detail

Summary

• ID
  rs232616918
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110682901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCAAAGGAA GGGCTTTGTA TCCCAGGCTA
  GAGGCAGCTT TAACTCAAAT GCTCGGCCTG CTGTCACCGA GCTTGACCCA GACAGTATAC
  TAGGCTGGCT TGAGAAGTGT TTGCAGAGCG CGGGCATTTG GAAATTGCAA AGTCATTTTT
  W
  AAAGTTTTTC CTTCATTTTT AACAAACATT AAAGACGGGC AGCGCAGTGC TTTCATTTTA
  TTTAAGGGCT ATATAGGAAA ATGAAGCATT TCAAACTATA CTTCCAGGTG GTATTTTAAA
  AGATGGGTTA TGTATGTATG CCACAGTATG                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322401276	CHEV_7_118227208	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232616918					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110682901 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19582	CpG island 19582	92 bp distal
Eif4g2	eukaryotic translation initiation factor 4, gamma 2	664 bp upstream
Gm57201	predicted gene, 57201	within coordinates
Rr381309	regulatory region 381309	within coordinates
Rr653396	regulatory region 653396	1119 bp distal
Rr653397	regulatory region 653397	688 bp distal
Rr653398	regulatory region 653398	174 bp distal
Rr653399	regulatory region 653399	922 bp proximal
Rr653400	regulatory region 653400	1513 bp proximal
Tssr68539	transcription start site region 68539	489 bp downstream
Tssr68540	transcription start site region 68540	467 bp downstream
Tssr68541	transcription start site region 68541	350 bp downstream
Tssr74298	transcription start site region 74298	1639 bp upstream
Tssr74299	transcription start site region 74299	1443 bp upstream
Tssr74300	transcription start site region 74300	1188 bp upstream
Tssr74301	transcription start site region 74301	1154 bp upstream
Tssr74302	transcription start site region 74302	1063 bp upstream
Tssr74303	transcription start site region 74303	657 bp upstream