rs232645889 SNP Detail

Summary

• ID
  rs232645889
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:81672219 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTCATTATA AGCCATAATT GCCACAGCAA
  TGTCACCAAT GACATTGCTC ATaatcatgg caggaacatg gcagacatgg tgctagagag
  gtagttgaga gctttacatc ctgatccaca aacagaagat gggggtgggg tgggggtggg
  K
  caatggcACT TGTAGAATGA GGGTCTGAAT TAGATAAAGG AAGACTAGAG AGGTCCAAAC
  AAAATTATAA TTAGAGAAAA ATAACTTTGA CAGAAAATAA ACAATATCTG ATAAAAATTT
  ACTTGGTTAT ATTTAACATT CACCATTCAC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319815920	CHEV_1_81691079	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232645889					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:81672219 () rs orientation: forward

Symbol	Name	Function Class
Gm70553	predicted gene, 70553	within coordinates
Rr413999	regulatory region 413999	1655 bp proximal