rs232676030 SNP Detail

Summary

• ID
  rs232676030
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:75425639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCTCAGTAA TGCTCATGGG ACTGTGGTGA GAATGTAGAA
  AAAGCACTCA GCAGATAGTA ACTGCTATTG TTATGACCCA AGGCTTTCCA CTGCCTTTTA
  R
  CTACTCTATT GTCTGACTCT AGATGACTAG GCCTATCTAG AGTCTCTGGG TTAAAGATTC
  CACATAAAAG AGGGGAAAGG TTGACTGACC TTCGAGAAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324673333	CHEV_14_75588006	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232676030					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:75425639 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Lcp1	lymphocyte cytosolic protein 1			Intron
				Noncoding-Transcript-Variant
Rr495439	regulatory region 495439			1490 bp distal
Tssr126634	transcription start site region 126634			905 bp downstream