rs232678415 SNP Detail

Summary

• ID
  rs232678415
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:88130576 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGTTGGAA AGGGAACTGG
  GGGACTGGAA AAACAGCCCA GTTAGTAAAG CGCTATCTGC ACAAACATGA AGACCTGAGT
  TCAGTCCCCA GCACTGCTAC TGAAGTCTCC TCATCCTAGG GCTGGGGCAG GGGTCAGGGA
  GAGACAGGTG CATCCTTGAG GCAGTGGCCA GCCAACCAGC CTCACCAGTC CCAGTGAGAG
  Y
  TCTTGTCTCC AAAAGAAGGA TAGCCAGGCT CCTGAGAAGT CACACTCAAG GTCGACTTCT
  GCCCTCCACT TGTACACACA GGAATGCTCT AGGGGCTGGG GTGTGGGTGT GGCTGTGGGT
  GGGAGCTGGG ATGGGCACGG GATGGGGATG CAAGCATGGT GGTGGGGATT GGGTGGGGAA
  TAGTTGAAAA CTCTCAGAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325500224	CHEV_17_88222488	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232678415					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:88130576 () rs orientation: forward

Symbol	Name	Function Class
Gm50039	predicted gene, 50039	1925 bp upstream
Rr393080	regulatory region 393080	within coordinates