rs232679421 SNP Detail

Summary

• ID
  rs232679421
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:79164617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAGAAgcag gggtctgtta ccttcattcc
  actgaagagg aagaagttga aaatcaataa atctgcattt tctttaccta aaacctctcc
  ctgggttcta agggagcagc tggctttggc gcctggtgtg gcttacctca ccaggcttca
  T
  ggcttcgttc tccatttctt tttgtgttga gagcaaaagc aagggttggg aacactggga
  cctaaatgga gctgccaggt gttctctgtc acactgggca ccagatcctt caggaaggta
  ggtagcacct atgtgttctC AGGCGATTCC                                 
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323759449	CHEV_11_79087293	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232679421					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:79164617 () rs orientation: forward

Symbol	Name	Function Class
D11Mit94	DNA segment, Chr 11, Massachusetts Institute of Technology 94	958 bp proximal
Gm44787	predicted gene 44787	within coordinates
Rr241861	regulatory region 241861	583 bp proximal
Rr251784	regulatory region 251784	within coordinates
Tssr109475	transcription start site region 109475	89 bp downstream