rs232729434 SNP Detail

Summary

• ID
  rs232729434
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:41497754 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAGTTCAC CCTTGTAGCT
  TCGCCATTTG CCGGCAGGCA GGTAGACATC ACGCTCTTGC TTACCAGGCT CTAGCACCGG
  CGCCACCAAC AGCGTGTCCC CGATGAGAAA CTGTGAGTCA ATGCGATGGG CCGTTTCATC
  CCCCGGTGCG ATCCACCACA GGGGGCGCAC GATGGGGTCG CCAGTGTCGG TGATCTCACC
  R
  GCAAGCTCTA GCAGCAGTGG CGCCACGAGG GAGGCGCGCA GAGCAGCGAA TTTGTGTGCG
  ATGGCTACCA CTTCTGCGTC GTACTGCCAA GGAGGGATTG AAAACTGCAT GGCAGGCATG
  AAGGCGGCCA CCTCCAGCCA GCGCACGTAG AGCTCGCGCT CTGGCCCCGG CCCATCTTGG
  CGGCCGGCTG TGCGCTCCGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321092846	CHEV_4_41444787	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232729434					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:41497754 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14157	CpG island 14157	within coordinates
Myorg	myogenesis regulating glycosidase (putative)	within coordinates
Rr590655	regulatory region 590655	1439 bp distal
Rr590656	regulatory region 590656	1550 bp proximal
Tssr41339	transcription start site region 41339	1421 bp upstream
Tssr41340	transcription start site region 41340	467 bp downstream