rs232736643 SNP Detail

Summary

• ID
  rs232736643
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:46307672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGAG CCGGTCCCCC TTTCCTCTCT
  C
  TACCTCAGGA TTGCATGCAT GTGCG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325822221	CHEV_19_46393723	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232736643					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:46307672 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10993	CpG island 10993	646 bp distal
Psd	pleckstrin and Sec7 domain containing	within coordinates
Rr548704	regulatory region 548704	652 bp distal
Tssr159621	transcription start site region 159621	1273 bp upstream
Tssr159622	transcription start site region 159622	1268 bp upstream
Tssr159623	transcription start site region 159623	1171 bp upstream
Tssr159624	transcription start site region 159624	1156 bp upstream
Tssr159625	transcription start site region 159625	1086 bp upstream