rs232748126 SNP Detail

Summary

• ID
  rs232748126
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:80565788 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAGGTGGAA ATTGAGAGTA ATGTAATCCA
  CCTCAGCACA CAGAACAGAG CCAACTTTCA TTCCTCCAAA GAATACAGCT TGTGTTTTGT
  TTAAAGGTGA GATTCTAAAC CACTGGTAGA TGGCTGAAAT ATAGCTTTTT TTTTTTTTTT
  Y
  CTCTTTTGAG TAAGGGTGGT AGTGAGAGGT TTTGGTACCA GTTTCAAGAA TAGAGTCCTT
  TATATTTAAA CGTTCTCAGA GGATCAGACA AGCAGTAACA ATTTGTTCAA GGTCAACTTT
  TTTTCTTACT TTGTCTTAAG TCTTTCTTAC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323024907	CHEV_9_80577342	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232748126					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:80565788 () rs orientation: forward

Symbol	Name	Function Class
Rr683772	regulatory region 683772	1487 bp distal
Rr683773	regulatory region 683773	60 bp distal
Tssr86335	transcription start site region 86335	1822 bp downstream