rs232748816 SNP Detail

Summary

• ID
  rs232748816
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52845181 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATAGCATT GGAAATGTAA
  TTGAGGAAAA TATGTAATAA AAATAAATAA ATAAATAAAA ATTCAAATGG TCTTAAAAAT
  ACTAACTTGT CATTAACTTC ACTTAATTAG ACTAATAGGG CTGGCAAGAT GGCTCAGTGG
  ATAAGAGCAC TGACTGCTCT TCTGAAGGTC CTGAGTTCAA ATCCCAGCAA CCACATGGTG
  T
  TTCACAACCA CCCGTAATGA GATCTGATAC CCTCTTCTGG TGCTGTCTGA AGATAGCTAC
  AGTGTATTTA TTTATAATAA TAATAAATAA ATCTTTGGGC TGGAATGAGC AGGGACTGAG
  CAAGCAGGGT TGACCATAGT GAGCAGAGGT CCTAAAATTC AATTCCCAAC AACCACATGA
  AGACTCACAA CCATCTGTAC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324040920	CHEV_12_53899385	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232748816					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52845181 () rs orientation: forward

Symbol	Name	Function Class
Akap6	A kinase anchor protein 6	within coordinates
Gm51971	predicted gene, 51971	within coordinates
Gm59837	predicted gene, 59837	1092 bp downstream
Rr466053	regulatory region 466053	1611 bp distal
Rr466054	regulatory region 466054	1326 bp proximal