AAGGCCAGGC TCTGCCTTCA GGGAACAAGG GCATTCTCCA TCGTGGAGAT ATGAGACACT GGGGAGTGGA CCACTGCTTG TAGACCAGGC TACCCCACTG ACGCTGAGGC AAGAGGCCTC AAGGTTGTGG CCAGCCATCC TGAGAAACCT AACAATACCT TGTCTCAAAA AAATTTTATT AAAAAAATCT TTAAAAAGAA R AAAGTTGAGA AGACTGCACA TCCCCAGACC ACAGGACTCA CTCGGTCTCC ATTAGAGCAT CTCAAGAGTC TTTCTCAATA GATTAAACAG GAAATCAACC TGCTCACCAA GACAAAAGGC TTACATAGAA GTGAAATGTT GATGAGTGGC TCACACTTTG TTATCTGATG TTGACATTTT AACCTTGCAG TTTAAAAACT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss323874766 | CHEV_12_4717635 | CHEVERUD | SCREENING_POP | f | SNP | G | A |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs232764348 | SNP | G | A |
Location: Chr12:4760829 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm53750 | predicted gene, 53750 | within coordinates | ||||||
Itsn2 | intersectin 2 | within coordinates | ||||||
Rr260648 | regulatory region 260648 | 1029 bp distal | ||||||
Rr260649 | regulatory region 260649 | 1972 bp proximal | ||||||
Rr263604 | regulatory region 263604 | 1445 bp distal | ||||||
Tssr112576 | transcription start site region 112576 | 1507 bp upstream | ||||||
Tssr112577 | transcription start site region 112577 | 1526 bp upstream | ||||||
Tssr115645 | transcription start site region 115645 | 1386 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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