rs232782887 SNP Detail

Summary

• ID
  rs232782887
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:41495737 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGCATAAA ATCGGTCTTT
  TTAAACCCCC AAGAATCCTT GTTTTTAAGC AAGAAAACAA CAAATACTAC TTCAATAGCT
  CTCTTTTATT GAGCACCTGC TTTGTGTCAG GCACTTTCCA CATGTCTGTG CTTATTATTA
  AATGACCTCA GAGGTAGGTT TTATATCACT CTTACATAGG AAAAACTGAG GCTCAGTGGG
  R
  TAAGCAGCAG CTTATTCAAG GTCACCCAGC TGACTGACAA ACGAAGACTG CGAATATGGC
  TCCCGGAAGA ATGCTTGCTT AGTATTCAGC GCCCTGAGTT CTAGCTTCAA CACTGCCAAG
  AAGAAGAAAC CAAAGAATTG GCATTGGAGA TGGGCATCGG GGGAGCCCCG AAGCTCTCCC
  CAGGACCTTT CACCCAGAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321092829	CHEV_4_41442770	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232782887					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:41495737 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14157	CpG island 14157	1652 bp proximal
Myorg	myogenesis regulating glycosidase (putative)	within coordinates
Rr590654	regulatory region 590654	858 bp distal
Rr590655	regulatory region 590655	within coordinates
Tssr41339	transcription start site region 41339	582 bp downstream