rs232831208 SNP Detail

Summary

• ID
  rs232831208
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:60214868 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CATGCTCGC TATGACTCTA TCCTTCTGGG
  GTCCTGGGAG AAAGAGATAA TGCCAAGGAA TGGGATCAGG CCGTATGTAC CTGGCAAGTA
  CCCAGTCCTG GGGATGTTAG CCAGCAGCCT CGGAACCTAG AGAGTGAGCC TGAGTCTCCC
  T
  ACGTAAATGT CCATTCCCGC TTGCTAACAC AAAGCTTGCT GGCTCAGACG GTCCCTGAGG
  ACTCTGAAAC ACCCTCCAGC CTGGGTGGAC CCTGGCTTGA TGCCTACCTG TCCATTGCTG
  CCAGCATCAG GGTCCCGGGC CTTGACTGTG                                 
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323325224	CHEV_10_59841837	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232831208					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:60214868 () rs orientation: forward

Symbol	Name	Function Class
Cdh23	cadherin related 23 (otocadherin)	within coordinates
Rr432129	regulatory region 432129	979 bp proximal
Rr432130	regulatory region 432130	1927 bp proximal
Tssr93630	transcription start site region 93630	1498 bp upstream
Tssr93631	transcription start site region 93631	1557 bp upstream
Tssr97724	transcription start site region 97724	1133 bp downstream