rs232836725 SNP Detail

Summary

• ID
  rs232836725
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:68128769 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCAAGCACA AGGGTCACAG CCCCTGCCTC AGGAGCTCTC
  AGGAGCTCTC AGAGTCTCTC AGGAGCGGCT CTCTCCAGCA AAGCTGTGAA CAGTGAGAGA
  A
  TGCCTCTGAA GGGAGTACCT GCCCCTGGAA AGTTTGACAC GCTGAAAGCT TAACAACCCC
  AACAGGTGAC AAGGGACAAA CCATTAGGCT AAATCCCCC                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325009001	CHEV_15_68088482	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232836725					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:68128769 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7146	CpG island 7146	1086 bp proximal
Rr303486	regulatory region 303486	369 bp distal
Rr311825	regulatory region 311825	431 bp proximal
Rr404424	regulatory region 404424	1708 bp upstream
Tssr131499	transcription start site region 131499	1354 bp upstream
Tssr131500	transcription start site region 131500	1671 bp upstream
Tssr134627	transcription start site region 134627	1914 bp downstream
Zfat	zinc finger and AT hook domain containing	within coordinates