rs232844332 SNP Detail

Summary

• ID
  rs232844332
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84354937 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCAGAAGT AGGAAACAAC
  TTTGGGAAGG AGATGCCCAG TGAGACGCAA TACCTCCCCT ACATGCACGC AAGCACTTCT
  ATACGCAAAC CCCGCTCTTC ACGCTCATCA AATGGATGTA GGAAAGCAAG AAAGCCCAGG
  TTCATCATGA TGGTGGAGAA GACCTATCTT AAGACATAAA TCCTCTAAAG ATTTTCCACC
  T
  TCAAAGACAT GTGCTACAAA CATAGCTATA ATTAAAGCAC ATGTAGATCT ATCCAAGACA
  TTTTTTTTTT CGTTTTCCAC ACTTATCTCA AACAAGCAGC CCATTGCAGC AACAAAATCT
  TCCTATATTG CTCCCTAGTG TCACATTTTA TTTCCTCAGA CATTCTTTTG AAAACATGCT
  CTAATGTCTT TCTTGCCTAA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325260814	CHEV_16_84558294	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232844332					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84354937 () rs orientation: forward

Symbol	Name	Function Class
Gm32073	predicted gene, 32073	233 bp upstream
Rr404934	regulatory region 404934	1608 bp upstream
Rr518505	regulatory region 518505	204 bp proximal
Rr518506	regulatory region 518506	305 bp proximal
Rr518507	regulatory region 518507	1596 bp proximal
Rr518508	regulatory region 518508	1727 bp proximal
Tssr139145	transcription start site region 139145	881 bp downstream