rs232852135 SNP Detail

Summary

• ID
  rs232852135
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:66877270 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACGGAGAGAT GAGGTATGGG CATGTTTCTG TCCTTATGTG
  GGGTTTCCAG GATGTACGAT GCACCTGATG CATGATGGGT GCACCTGATG CATGATGGGT
  A
  CACCTGATGC ATGATGGGTA CACCTGATGC ATGATGGGTG CAGGCAATCT TGCAAAACCA
  ATGACGTGAA GCAAAAGACA GTTGGTGGTC AGCCATCTC                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321564117	CHEV_5_67111166	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232852135					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:66877270 () rs orientation: forward

Symbol	Name	Function Class
4933424C09Rik	RIKEN cDNA 4933424C09 gene	within coordinates
Gm43280	predicted gene 43280	8 bp downstream
Rr114034	regulatory region 114034	1670 bp distal
Rr129799	regulatory region 129799	932 bp proximal
Rr129800	regulatory region 129800	1932 bp proximal
Rr378078	regulatory region 378078	604 bp upstream
Tssr1499	transcription start site region 1499	4 bp upstream