rs232869435 SNP Detail

Summary

• ID
  rs232869435
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142618334 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGATTTGG CCTATTTTTA
  AGTCTGGCAG CAGGTCCAGG CCATGGTGCC TTCTCCTCTG GTCTGGCCAG GCAGGGAACA
  ATGGGCCTGA CTTTGTGCAA GGAAGCTTGG ACTGCCCTAC AGTGTTGCCG TGGAGACTGG
  GGGATGGACG GCTTCTGCCG AGGGACCAAG AGATGGAACG CTCATCAAAG ACACAGTGGG
  Y
  TTTCCCAGGG GCAGAAGGGG GTATTGTGGG CACTGAGGCA GGGACATGGC CCAGTTGGTA
  CCTCATGGGC TACAGTGCTC CCCTGTAAAC TGTGACAGAC ATTGGGTGCT CTGCTTAAGC
  TTCCCCTACC ATTCTCTTAG CCATCCACCC ACACACAGGA TCCCGTCCTT AGAGTTAGGT
  GAGCCAAACA GTTATACACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322473962	CHEV_7_150250502	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232869435					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142618334 () rs orientation: forward

Symbol	Name	Function Class
Cd81	CD81 antigen	within coordinates
Rr366644	regulatory region 366644	840 bp downstream
Tssr70273	transcription start site region 70273	351 bp upstream
Tssr70274	transcription start site region 70274	372 bp upstream
Tssr70275	transcription start site region 70275	1157 bp upstream
Tssr70276	transcription start site region 70276	1187 bp upstream
Tssr70277	transcription start site region 70277	1336 bp upstream