rs232883877 SNP Detail

Summary

• ID
  rs232883877
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:113393598 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGGT CCTAGACATC AGAGTAATTA
  Y
  AGACCCAGTG AAGTAGCCCT TCATC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324175498	CHEV_12_114668189	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232883877					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:113393598 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighd4-1	immunoglobulin heavy diversity 4-1	550 bp downstream
Ighg	Immunoglobulin heavy chain (gamma polypeptide)	within coordinates
Ighj1	immunoglobulin heavy joining 1	145 bp upstream
Ighj2	immunoglobulin heavy joining 2	463 bp upstream
Ighj3	immunoglobulin heavy joining 3	846 bp upstream
Ighj4	immunoglobulin heavy joining 4	1411 bp upstream
Tssr115504	transcription start site region 115504	249 bp upstream
Tssr118005	transcription start site region 118005	1431 bp upstream
Tssr118006	transcription start site region 118006	1400 bp upstream
Tssr118007	transcription start site region 118007	1354 bp upstream
Tssr118008	transcription start site region 118008	1327 bp upstream
Tssr118009	transcription start site region 118009	1316 bp upstream
Tssr118010	transcription start site region 118010	1178 bp upstream
Tssr118011	transcription start site region 118011	1080 bp upstream
Tssr118012	transcription start site region 118012	845 bp upstream
Tssr118013	transcription start site region 118013	830 bp upstream
Tssr118014	transcription start site region 118014	726 bp upstream
Tssr118015	transcription start site region 118015	630 bp upstream
Tssr118016	transcription start site region 118016	476 bp upstream
Tssr118017	transcription start site region 118017	136 bp upstream
Tssr118018	transcription start site region 118018	398 bp downstream
Tssr118019	transcription start site region 118019	415 bp downstream
Tssr118020	transcription start site region 118020	471 bp downstream
Tssr118021	transcription start site region 118021	611 bp downstream
Tssr118022	transcription start site region 118022	643 bp downstream
Tssr118023	transcription start site region 118023	808 bp downstream