rs232929495 SNP Detail

Summary

• ID
  rs232929495
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:107698891 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTCAATTT TTATTTGTAG
  AATTGAAAAA ACAGTGAGAG CTGCCCAAGC AATGATGGTG CACACTTTTA ATCCCAGCGC
  TTGAGAGGCA GAAGCAGGAA GATCTATGAG TTAGAGAACA GCCTGGTCTA CGGAGCAAGT
  TCTGGAACAG CCATAGATAC ACAGAAAAAC ACAGTCAAGA GAAGGAAGAG GAGGAAGAGG
  A
  GAAAGAGGAA GAAGAGGGGG AAGAGGGGGA AGGGGGAGGG GAGAGGGGGA GAGAGGGAGA
  GGGGGAGAGG GGGGAGAGGG GGAGAGGGGG AGAGGGGGGA GAGGGAGAGA GGGAGAGACA
  GAGAGCACTG ATGCAAATAC ACCTTTAAAA GAATTCAACA GTCCACAGAC TCACTATGTT
  GTCATTTCCT GATTCTACAA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C58/J	CAST/EiJ	KK/HlJ	LP/J	PL/J	SEA/GnJ	SPRET/EiJ	ZALENDE/EiJ
ss389866906	MGP_WTSI_13_108352471	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C58/J	CAST/EiJ	KK/HlJ	LP/J	PL/J	SEA/GnJ	SPRET/EiJ	ZALENDE/EiJ
rs232929495					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss389866906	MGP_WTSI_13_108352471	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:107698891 () rs orientation: forward

Symbol	Name	Function Class
Gm31920	predicted gene, 31920	within coordinates
Gm32004	predicted gene, 32004	within coordinates
Rr278138	regulatory region 278138	616 bp distal