rs232932397 SNP Detail

Summary

• ID
  rs232932397
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97147678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCACTATAA GGAAAATTCT
  GTGAAGACAG CCGTTTCCTC TGTCAGGGTC CCAGCTGACA TTTGGTTGGC ATTCAGTGAC
  GTTTTCATGA ATGAAACCGA GTGACAGGAT ACGTATTCTA GATGGCAATG GTCTCAGTCT
  GCTGGTTCTT GTTGCTTACA CTTCATAAAG CTTGTCTTGA AGGCAGGGGA CCCTGACAAA
  Y
  GTTAGAGTCC TGGATCCAGC CATGCCTGAA AGCCACCAAA TGCTTTTATT TAACTGTATT
  CTCTACTGAT CTTTGTTTTG GGTACACTGT TCTGCGTTGT GCCTTTGTCC CTTGTGACTG
  ACCTAGTCCT GGTGCCCTCA GTGGAGGTGT GAGTTGTCTA TGTGTTCTTA TGTGCCAGAC
  CAAGCTAGCC TGCATACGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325076415	CHEV_15_97080228	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232932397					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97147678 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7616	CpG island 7616	1738 bp distal
Gm57814	predicted gene, 57814	635 bp upstream
Pced1b	PC-esterase domain containing 1B	within coordinates
Rr305670	regulatory region 305670	278 bp distal
Rr308785	regulatory region 308785	within coordinates
Rr308786	regulatory region 308786	1723 bp proximal
Rr312356	regulatory region 312356	877 bp distal