rs232968926 SNP Detail

Summary

• ID
  rs232968926
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:105290943 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACT GCTTCCTAGG AGGTCAGTGA
  Y
  AACAGAACAA AGACAAGCCT CTAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322370124	CHEV_7_112790250	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232968926					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:105290943 () rs orientation: forward

Symbol	Name	Function Class
Arfip2	ARF interacting protein 2	1320 bp upstream
Cpgi19541	CpG island 19541	515 bp distal
Gm22504	predicted gene, 22504	602 bp downstream
Gm45799	predicted gene 45799	within coordinates
Rr400513	regulatory region 400513	1188 bp downstream
Rr652793	regulatory region 652793	1670 bp distal
Rr652794	regulatory region 652794	1431 bp distal
Rr652795	regulatory region 652795	1136 bp distal
Timm10b	translocase of inner mitochondrial membrane 10B	within coordinates
Tssr2358	transcription start site region 2358	1315 bp downstream
Tssr68382	transcription start site region 68382	1222 bp downstream
Tssr68383	transcription start site region 68383	1150 bp downstream
Tssr68384	transcription start site region 68384	927 bp downstream
Tssr68385	transcription start site region 68385	709 bp downstream
Tssr68386	transcription start site region 68386	666 bp downstream
Tssr68387	transcription start site region 68387	601 bp upstream
Tssr68388	transcription start site region 68388	879 bp upstream
Tssr74083	transcription start site region 74083	1366 bp upstream