rs233001204 SNP Detail

Summary

• ID
  rs233001204
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:163310335 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAACCCTAT TGTGTCTCTA
  TCACCAGCCA GTGGGCAGGA AAGCCTCAGA ACAAGTGAGC ACTGAGTTGC TCTCTCAGCT
  TAACATTCAT CAACTAATAC AAGTCTGCTT CTCAGTTTTA TTCCTTCCTT CCTTCTTTCT
  TCTTCCAGTC AGGAGCTCAC AATGTGGCCC TGGCAAGGTA ACCTCAACCT CACAGAGATC
  Y
  GCCTGCCTCT GCCTTCCCGG TGCTGGGATT AGAGGCGTGC AGCACCGTGC CTCCCGGCCT
  CCAGTTATAT TTCTAAGAGA GGGAACATTC CTATGAGGTG CAATTTCATA TGACAAGCCA
  AGAATTTGGT TTATACAAAA AGTTAGTGTT CTAAAACAAA ACAAAACAAA ACAAAACAAA
  AAAAACCCTC AAAACAATTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320603324	CHEV_2_163294151	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233001204					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163310335 () rs orientation: forward

Symbol	Name	Function Class
Fitm2	fat storage-inducing transmembrane protein 2	mRNA-UTR
Rr569385	regulatory region 569385	1243 bp distal