rs233020532 SNP Detail

Summary

• ID
  rs233020532
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107181855 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATATCTGGA GTTCTGGCCC GGTACCTCCT
  TCCACTCCTT AGTGGGATAT GTGGACTTTC ACATTCTCTG TTGCGCCTAC CCGCAACTCT
  CCTTTCTCAG AGCTTGTTTG CAGGAAGGGG AGAAACAAAA GAAACTGAAG TTAAAGACTT
  S
  ATAGTCTTTA TATAAATCTC GCTCCACAAA GGATGCCATC TAAACTCTCC TCTAGAAAGG
  AGATCATGGG GGTGGGGGAA ATAGGTTTAA AGGAAGGGCT AGAGGTATGT GATAGAAATA
  GGAGACTTAA GAAGAGACAT TGGACTAGTG                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320865158	CHEV_3_107077457	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233020532					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107181855 () rs orientation: forward

Symbol	Name	Function Class
Rr582951	regulatory region 582951	279 bp distal
Rr582952	regulatory region 582952	495 bp distal
Rr582953	regulatory region 582953	1667 bp proximal