rs233033578 SNP Detail

Summary

• ID
  rs233033578
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3189860 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CTGAA CTCTTCTCAC AACTTGACTC
  R
  TGGACTGTGG TCTGACAGTA CCTAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S5/SvEvBrd	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C58/J	JF1/MsJ	MOLF/EiJ	PL/J	PWK/PhJ	QSi5/Ianm	SJL/J	SPRET/EiJ
ss920084348	MGP_WTSI_10_3239860	EVA_MGPV3	EVA_MGPV3	r	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S5/SvEvBrd	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C58/J	JF1/MsJ	MOLF/EiJ	PL/J	PWK/PhJ	QSi5/Ianm	SJL/J	SPRET/EiJ
rs233033578					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss920084348	MGP_WTSI_10_3239860	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	r	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3189860 () rs orientation: reverse

Symbol	Name	Function Class
Rr230143	regulatory region 230143	1044 bp distal