rs233038005 SNP Detail

Summary

• ID
  rs233038005
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:79517880 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCTGAGAG ATCTCATGGG
  TCTAGGTTAG TTGGGACTTC TGGTCTTCCT ATAGTGTCAC CCTCCTCCTT AACCTCTTCC
  AGCATTTCCC TAATTCAACC ATAATATGGG TCACAAGCTT CTGTCCATTG GTTGGGTGTC
  AATATCTGCA TCTGGCACTT TCAGGTACTT ATTGGGCCTA TTGGAGGGCA GGCATGATAG
  K
  CCCCATGCAT GTCTTTTGGG TCATTCTTCC TTCATAATGT TTCCTCAGCC TGTTCAACAG
  GGAGAGGTGA ATATAGATGT CCACTTTGAG GTTGATTACT CTGTCTTTTA TTCTCAGCAC
  TTTCACCAGC TATGTATGCC CATTTGCATA GACAGCTCTC ATTCTGCATT GATTGAAGCT
  TCTTTTAATG CACTAGGCAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321835111	CHEV_6_79490891	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233038005					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:79517880 () rs orientation: forward

Symbol	Name	Function Class
Gm6261	predicted gene 6261	311 bp upstream